DisGeNET - a database of gene-disease associations

List of associated variants

Depressive disorder, C0011581

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1220000453	ZFP91-CNTF ; CNTF	0.882	0.120	11	58624189	synonymous variant	C/T	snv			5
rs10434	VEGFA	0.701	0.480	6	43785475	3 prime UTR variant	A/G	snv		0.59	17
rs12137417	TSNAX-DISC1 ; DISC1	0.925	0.080	1	231950407	intron variant	G/A	snv		0.17	3
rs2793094	TSNAX-DISC1 ; DISC1	0.925	0.080	1	231741236	intron variant	G/A	snv		0.97	3
rs7305115	TPH2	0.807	0.200	12	71979082	synonymous variant	A/C;G;T	snv	4.0E-06; 0.56		8
rs120074175	TPH2	0.827	0.080	12	72031544	missense variant	G/A	snv	1.2E-05	7.0E-06	7
rs78162420	TPH2	0.882	0.120	12	71941600	missense variant	C/A	snv	2.1E-03	7.1E-04	4
rs12229394	TPH2	0.925	0.080	12	71999134	intron variant	G/A	snv		0.29	3
rs1800532	TPH1	0.763	0.160	11	18026269	intron variant	G/T	snv		0.33	15
rs1173546708	TPH1	0.851	0.120	11	18040661	synonymous variant	G/A	snv	4.0E-06		5
rs1799913	TPH1	0.851	0.080	11	18025708	splice region variant	G/A;T	snv	0.39	0.33	5
rs2075650	TOMM40	0.662	0.360	19	44892362	intron variant	A/G	snv	0.13	0.13	45
rs1061622	TNFRSF1B	0.633	0.760	1	12192898	missense variant	T/G	snv	0.22	0.22	33
rs1800629	TNF	0.472	0.920	6	31575254	upstream gene variant	G/A	snv	0.12	0.14	169
rs10514299	TMEM161B-AS1	0.827	0.120	5	88367793	intron variant	C/T	snv		0.21	6
rs4986791	TLR4	0.456	0.840	9	117713324	missense variant	C/T	snv	5.7E-02	4.9E-02	182
rs2291738	TIMELESS	0.807	0.160	12	56421497	splice region variant	T/C	snv	0.43	0.39	8
rs2291739	TIMELESS	0.925	0.080	12	56420869	missense variant	G/A;C	snv	0.49; 4.0E-06		6
rs7486220	TIMELESS	0.925	0.080	12	56443632	intron variant	C/T	snv			3
rs1003880422	TH	0.925	0.080	11	2166716	missense variant	G/A;T	snv	6.9E-06		2
rs2736100	TERT	0.550	0.880	5	1286401	3 prime UTR variant	C/A	snv		0.52	83
rs738499	TEF ; LOC105373042	0.851	0.120	22	41381096	intron variant	G/T	snv		0.76	9
rs1325757098	TAT ; TAT-AS1	0.827	0.160	16	71576223	missense variant	C/T	snv	8.0E-06	7.0E-06	6
rs8192625	TAAR6	0.925	0.080	6	132571193	missense variant	G/A	snv	6.2E-02	7.8E-02	3
rs397514679	SYN1	0.790	0.200	X	47574321	stop gained	G/A	snv			9